STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y9K3_CIOSAOBG-type G domain-containing protein. (375 aa)    
Predicted Functional Partners:
H2YQN4_CIOSA
Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
   
 
 0.899
H2ZDQ5_CIOSA
Hflx-type G domain-containing protein.
  
  
 0.865
H2YF62_CIOSA
Uncharacterized protein.
  
 
 0.815
H2ZPR7_CIOSA
Uncharacterized protein.
  
 
 0.804
H2YR98_CIOSA
Tr-type G domain-containing protein.
 
 
 0.792
H2Z4N1_CIOSA
Uncharacterized protein.
  
 
 0.784
H2YJ66_CIOSA
Uncharacterized protein.
     
 0.771
H2ZNS2_CIOSA
Uncharacterized protein.
    
 
 0.767
H2ZPN0_CIOSA
RF_PROK_I domain-containing protein.
  
 
 0.762
H2YUK6_CIOSA
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.743
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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