STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y9L2_CIOSAGlutamine amidotransferase type-1 domain-containing protein. (286 aa)    
Predicted Functional Partners:
H2ZF65_CIOSA
ATP-grasp domain-containing protein.
   
 0.961
H2ZIL5_CIOSA
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.874
H2YWH4_CIOSA
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 
 0.804
H2YSL5_CIOSA
S1-like domain-containing protein.
    
 
 0.626
H2YGT5_CIOSA
Uncharacterized protein.
    
 
 0.559
H2YVY5_CIOSA
Uncharacterized protein.
    
 
 0.559
H2YXE8_CIOSA
G_PROTEIN_RECEP_F2_4 domain-containing protein.
    
 
 0.559
H2ZR02_CIOSA
DUF2040 domain-containing protein.
      
 0.507
H2Z6G1_CIOSA
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
    
 
 0.455
H2YDI6_CIOSA
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.403
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.