STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2YD65_CIOSAUncharacterized protein. (308 aa)    
Predicted Functional Partners:
H2ZEF2_CIOSA
Uncharacterized protein.
   
    0.932
H2ZKW7_CIOSA
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.857
H2YDZ4_CIOSA
Uncharacterized protein.
   
    0.854
H2ZI91_CIOSA
Uncharacterized protein.
   
    0.854
H2ZNI4_CIOSA
Uncharacterized protein; Belongs to the AAA ATPase family.
   
 0.816
H2Y6A4_CIOSA
BRCT domain-containing protein.
   
 0.805
H2ZHE4_CIOSA
Uncharacterized protein.
    
 0.790
H2Z480_CIOSA
Uncharacterized protein.
    
  0.785
H2Z5N6_CIOSA
AAA domain-containing protein.
   
 0.776
H2Z4T7_CIOSA
AAA domain-containing protein.
   
 0.767
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.