H2YEW1_CIOSA protein (Ciona savignyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

H2YEW1_CIOSA

Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (467 aa)

Predicted Functional Partners:

H2Z2P4_CIOSA

0.999

H2Y7N0_CIOSA

0.978

H2Y5I3_CIOSA

0.975

H2Y5W3_CIOSA

0.975

H2Y5W4_CIOSA

0.975

H2YQI4_CIOSA

0.975

H2Z0R8_CIOSA

0.974

H2ZEK6_CIOSA

0.974

H2Z5N2_CIOSA

0.968

H2Z9T3_CIOSA

0.968

Your Current Organism:

Ciona savignyi

NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2Y5I3_CIOSA	H2Y7N0_CIOSA	ENSCSAVP00000000581	ENSCSAVP00000001328	Sema domain-containing protein.	Uncharacterized protein.	0.439
H2Y5I3_CIOSA	H2YEW1_CIOSA	ENSCSAVP00000000581	ENSCSAVP00000003859	Sema domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.975
H2Y5W3_CIOSA	H2Y7N0_CIOSA	ENSCSAVP00000000711	ENSCSAVP00000001328	Sema domain-containing protein.	Uncharacterized protein.	0.437
H2Y5W3_CIOSA	H2YEW1_CIOSA	ENSCSAVP00000000711	ENSCSAVP00000003859	Sema domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.975
H2Y5W4_CIOSA	H2Y7N0_CIOSA	ENSCSAVP00000000712	ENSCSAVP00000001328	Sema domain-containing protein.	Uncharacterized protein.	0.437
H2Y5W4_CIOSA	H2YEW1_CIOSA	ENSCSAVP00000000712	ENSCSAVP00000003859	Sema domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.975
H2Y7N0_CIOSA	H2Y5I3_CIOSA	ENSCSAVP00000001328	ENSCSAVP00000000581	Uncharacterized protein.	Sema domain-containing protein.	0.439
H2Y7N0_CIOSA	H2Y5W3_CIOSA	ENSCSAVP00000001328	ENSCSAVP00000000711	Uncharacterized protein.	Sema domain-containing protein.	0.437
H2Y7N0_CIOSA	H2Y5W4_CIOSA	ENSCSAVP00000001328	ENSCSAVP00000000712	Uncharacterized protein.	Sema domain-containing protein.	0.437
H2Y7N0_CIOSA	H2YEW1_CIOSA	ENSCSAVP00000001328	ENSCSAVP00000003859	Uncharacterized protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.978
H2Y7N0_CIOSA	H2YQI4_CIOSA	ENSCSAVP00000001328	ENSCSAVP00000007592	Uncharacterized protein.	Sema domain-containing protein.	0.437
H2Y7N0_CIOSA	H2Z2P4_CIOSA	ENSCSAVP00000001328	ENSCSAVP00000011856	Uncharacterized protein.	Uncharacterized protein.	0.810
H2Y7N0_CIOSA	H2Z5N2_CIOSA	ENSCSAVP00000001328	ENSCSAVP00000012894	Uncharacterized protein.	STAT_int domain-containing protein.	0.738
H2Y7N0_CIOSA	H2ZEK6_CIOSA	ENSCSAVP00000001328	ENSCSAVP00000016022	Uncharacterized protein.	Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.	0.594
H2YEW1_CIOSA	H2Y5I3_CIOSA	ENSCSAVP00000003859	ENSCSAVP00000000581	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Sema domain-containing protein.	0.975
H2YEW1_CIOSA	H2Y5W3_CIOSA	ENSCSAVP00000003859	ENSCSAVP00000000711	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Sema domain-containing protein.	0.975
H2YEW1_CIOSA	H2Y5W4_CIOSA	ENSCSAVP00000003859	ENSCSAVP00000000712	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Sema domain-containing protein.	0.975
H2YEW1_CIOSA	H2Y7N0_CIOSA	ENSCSAVP00000003859	ENSCSAVP00000001328	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein.	0.978
H2YEW1_CIOSA	H2YQI4_CIOSA	ENSCSAVP00000003859	ENSCSAVP00000007592	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Sema domain-containing protein.	0.975
H2YEW1_CIOSA	H2Z0R8_CIOSA	ENSCSAVP00000003859	ENSCSAVP00000011180	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.974

page 1 of 3

Server load: low (14%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2023

Credits

Access

Info

About