STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2YF52_CIOSAUncharacterized protein. (773 aa)    
Predicted Functional Partners:
H2YHR2_CIOSA
Protein kinase domain-containing protein.
   
 0.994
H2ZCX5_CIOSA
Uncharacterized protein.
   
 0.989
H2YLQ4_CIOSA
Uncharacterized protein.
    
 0.988
H2ZNF7_CIOSA
Poly [ADP-ribose] polymerase.
    
 0.982
H2Z6Z4_CIOSA
HMG box domain-containing protein.
    
 0.920
H2ZJ99_CIOSA
Uncharacterized protein.
    
 0.915
Cs-CKI
Casein kinase I; Belongs to the protein kinase superfamily.
    
 0.907
H2YBQ0_CIOSA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.907
H2YF15_CIOSA
Uncharacterized protein.
    
 0.861
H2YS47_CIOSA
ANK_REP_REGION domain-containing protein; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.861
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.