STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2YG82_CIOSARTTN_N domain-containing protein. (610 aa)    
Predicted Functional Partners:
H2YGD6_CIOSA
Uncharacterized protein.
 
     0.890
H2Y9S3_CIOSA
PLA2c domain-containing protein.
   
 
 0.783
H2Z679_CIOSA
Phospholipase A2.
   
 
 0.783
H2Z901_CIOSA
Uncharacterized protein.
   
 
 0.783
H2YRC8_CIOSA
Aspartate aminotransferase.
    
 0.510
H2Z084_CIOSA
Lipase_GDSL domain-containing protein.
   
  0.496
H2YFM9_CIOSA
BH4_AAA_HYDROXYL_2 domain-containing protein.
     
 0.494
H2YF34_CIOSA
Uncharacterized protein.
    
 0.478
H2Z4Q8_CIOSA
Uncharacterized protein.
    
 0.477
H2Y9Q3_CIOSA
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide.
    
 0.457
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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