STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2YK13_CIOSAMFS domain-containing protein. (500 aa)    
Predicted Functional Partners:
H2YJC9_CIOSA
Uncharacterized protein.
    
  0.767
H2ZJI4_CIOSA
AB hydrolase-1 domain-containing protein.
    
 0.667
H2ZCZ6_CIOSA
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
     
 0.586
H2ZEY8_CIOSA
Serine--pyruvate aminotransferase.
  
 
 0.574
H2YA96_CIOSA
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.546
H2YHX6_CIOSA
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.455
H2ZAX0_CIOSA
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.455
H2YH53_CIOSA
Uncharacterized protein.
     
 0.450
H2ZID2_CIOSA
Uncharacterized protein.
     
 0.450
H2ZJN9_CIOSA
FAD-binding FR-type domain-containing protein.
    
  0.449
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.