STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2YQ75_CIOSADUF862 domain-containing protein. (179 aa)    
Predicted Functional Partners:
H2YRD4_CIOSA
VWFA domain-containing protein.
    
   0.881
H2Y4S5_CIOSA
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
   0.852
H2Y4Y9_CIOSA
Proteasome subunit alpha type.
    
   0.852
H2YB50_CIOSA
PCI domain-containing protein.
    
   0.852
H2YEJ4_CIOSA
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
   0.852
H2YIE6_CIOSA
AAA domain-containing protein.
   
   0.852
H2YKU5_CIOSA
Proteasome subunit alpha type.
    
   0.852
H2YVU9_CIOSA
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
   0.852
H2Z2U1_CIOSA
Uncharacterized protein.
    
   0.852
H2ZBG2_CIOSA
Proteasome subunit alpha type.
    
   0.852
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.