STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2YTC7_CIOSAFe-S_biosyn domain-containing protein. (129 aa)    
Predicted Functional Partners:
H2Z6Q0_CIOSA
Fe-S_biosyn domain-containing protein.
  
0.959
H2ZI56_CIOSA
NifU_N domain-containing protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
  
 0.943
H2ZDB8_CIOSA
Uncharacterized protein.
  
 0.883
H2YDM8_CIOSA
Nfu_N domain-containing protein.
  
 
 0.879
H2Z3A4_CIOSA
2Fe-2S ferredoxin-type domain-containing protein.
  
 
 0.799
H2YE03_CIOSA
Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
   
 0.794
H2YJI2_CIOSA
Aminotran_5 domain-containing protein.
  
 
 0.718
H2YXV6_CIOSA
Aminotran_5 domain-containing protein.
  
 
 0.718
H2Z5N5_CIOSA
Aminotran_5 domain-containing protein.
  
 
 0.718
H2ZBV2_CIOSA
J domain-containing protein.
     
 0.658
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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