STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2YW64_CIOSAF-box domain-containing protein. (215 aa)    
Predicted Functional Partners:
H2YRA0_CIOSA
Uncharacterized protein.
    
 0.992
H2YAK4_CIOSA
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.937
H2YV96_CIOSA
Ubiquitin-like domain-containing protein.
    
 0.900
H2YEL1_CIOSA
TPR_REGION domain-containing protein.
    
 0.847
H2ZI58_CIOSA
Uncharacterized protein.
    
 0.784
H2Z0F7_CIOSA
Ribosomal_L18_c domain-containing protein.
    
 
 0.779
H2Z125_CIOSA
Ribosomal_L18e/L15P domain-containing protein.
   
   0.771
H2Z9E6_CIOSA
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.766
H2YGY1_CIOSA
EAF domain-containing protein.
   
 
 0.765
H2YJZ3_CIOSA
Uncharacterized protein.
    
  0.765
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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