STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2YWW3_CIOSAHedgehog protein; Intercellular signal essential for a variety of patterning events during development. (547 aa)    
Predicted Functional Partners:
H2Z0N5_CIOSA
SSD domain-containing protein.
   
 0.971
H2Z3U7_CIOSA
Uncharacterized protein.
    
 0.969
H2YSQ7_CIOSA
Uncharacterized protein.
    
 0.959
H2YE33_CIOSA
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.835
H2YPS4_CIOSA
Peptidase_M24 domain-containing protein.
   
 
 0.761
H2Y9J4_CIOSA
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.760
H2YY95_CIOSA
NAD(P)-bd_dom domain-containing protein.
     
 0.742
H2YKI9_CIOSA
Uncharacterized protein.
   
 0.738
H2YE30_CIOSA
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.704
H2Z2W5_CIOSA
Uncharacterized protein.
    
 
 0.688
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.