Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2YXF8_CIOSAUncharacterized protein. (1425 aa)    
Predicted Functional Partners:
H2YAQ8_CIOSA
Tyrosine-protein kinase.
    
 0.844
H2ZQ00_CIOSA
Fibronectin type-III domain-containing protein.
    
 0.823
H2Y6N5_CIOSA
Uncharacterized protein.
    
  0.728
H2Y9J4_CIOSA
Uncharacterized protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.665
H2Y3Y2_CIOSA
Uncharacterized protein.
    
 
 0.664
H2ZK21_CIOSA
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.609
H2YEX6_CIOSA
OB_NTP_bind domain-containing protein.
    
 0.582
H2ZE22_CIOSA
Ig-like domain-containing protein.
    
 0.560
H2Y5I6_CIOSA
LID domain-containing protein.
     
 0.555
H2YRR6_CIOSA
Uncharacterized protein.
    
 0.555
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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