STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2YXJ2_CIOSAUncharacterized protein. (194 aa)    
Predicted Functional Partners:
H2YXB7_CIOSA
WH2 domain-containing protein.
    
 0.965
H2YIZ2_CIOSA
Uncharacterized protein.
    
 0.960
H2ZAQ1_CIOSA
Uncharacterized protein.
  
 
 0.910
H2YIV1_CIOSA
Uncharacterized protein.
    
 0.897
H2ZEC6_CIOSA
HSF_DOMAIN domain-containing protein.
    
 0.808
H2ZFH8_CIOSA
Uncharacterized protein.
     
 0.765
H2YEX5_CIOSA
EF-hand domain-containing protein.
    
 0.663
H2ZLG3_CIOSA
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.478
H2YQ79_CIOSA
Uncharacterized protein.
      
 0.457
H2YR40_CIOSA
Uncharacterized protein.
    
 
 0.434
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.