STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCSAVP00000010059annotation not available (212 aa)    
Predicted Functional Partners:
H2Z090_CIOSA
TPR_REGION domain-containing protein.
   
 0.997
H2Z766_CIOSA
RanBP2-type domain-containing protein.
   
 0.997
H2ZKR6_CIOSA
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.936
H2Z0W2_CIOSA
WD_REPEATS_REGION domain-containing protein.
    
 0.935
H2Z551_CIOSA
Uncharacterized protein.
   
 0.932
H2Y6B9_CIOSA
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.931
H2YKM4_CIOSA
Uncharacterized protein.
   
 0.927
H2YSA5_CIOSA
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.923
H2ZMM3_CIOSA
WD_REPEATS_REGION domain-containing protein.
    
 0.866
H2YPL5_CIOSA
Uncharacterized protein.
    
 0.863
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.