Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCSAVP00000010059annotation not available (212 aa)    
Predicted Functional Partners:
H2Z090_CIOSA
TPR_REGION domain-containing protein.
   
 0.935
H2Z766_CIOSA
RanBP2-type domain-containing protein.
   
 0.935
H2YKM4_CIOSA
Uncharacterized protein.
   
 0.914
H2Z551_CIOSA
Uncharacterized protein.
   
 0.913
H2YSA5_CIOSA
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.912
H2Y6B9_CIOSA
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.905
H2ZKR6_CIOSA
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.905
H2YPL5_CIOSA
Uncharacterized protein.
   
 0.900
H2Z0W2_CIOSA
WD_REPEATS_REGION domain-containing protein.
   
 0.900
H2YMB4_CIOSA
Uncharacterized protein.
    
 0.886
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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