H2YXK2_CIOSA protein (Ciona savignyi) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

H2YXK2_CIOSA

Uncharacterized protein. (388 aa)

Predicted Functional Partners:

H2YA63_CIOSA

0.968

H2ZD71_CIOSA

0.953

H2ZC36_CIOSA

0.935

H2ZJS8_CIOSA

0.902

H2YUL9_CIOSA

0.875

H2Y9Q9_CIOSA

0.868

H2ZEM0_CIOSA

0.863

H2ZID9_CIOSA

0.845

H2YLY6_CIOSA

0.817

H2YVJ7_CIOSA

0.803

Your Current Organism:

Ciona savignyi

NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
H2Y9Q9_CIOSA	H2YLY6_CIOSA	ENSCSAVP00000002057	ENSCSAVP00000006338	Uncharacterized protein.	Uncharacterized protein.	0.814
H2Y9Q9_CIOSA	H2YUL9_CIOSA	ENSCSAVP00000002057	ENSCSAVP00000009029	Uncharacterized protein.	Uncharacterized protein.	0.852
H2Y9Q9_CIOSA	H2YXK2_CIOSA	ENSCSAVP00000002057	ENSCSAVP00000010063	Uncharacterized protein.	Uncharacterized protein.	0.868
H2YA63_CIOSA	H2YLY6_CIOSA	ENSCSAVP00000002211	ENSCSAVP00000006338	Uncharacterized protein.	Uncharacterized protein.	0.741
H2YA63_CIOSA	H2YUL9_CIOSA	ENSCSAVP00000002211	ENSCSAVP00000009029	Uncharacterized protein.	Uncharacterized protein.	0.842
H2YA63_CIOSA	H2YVJ7_CIOSA	ENSCSAVP00000002211	ENSCSAVP00000009358	Uncharacterized protein.	PDZ domain-containing protein.	0.443
H2YA63_CIOSA	H2YXK2_CIOSA	ENSCSAVP00000002211	ENSCSAVP00000010063	Uncharacterized protein.	Uncharacterized protein.	0.968
H2YA63_CIOSA	H2ZEM0_CIOSA	ENSCSAVP00000002211	ENSCSAVP00000016036	Uncharacterized protein.	Uncharacterized protein.	0.656
H2YA63_CIOSA	H2ZJS8_CIOSA	ENSCSAVP00000002211	ENSCSAVP00000017844	Uncharacterized protein.	Tetraspanin.	0.508
H2YLY6_CIOSA	H2Y9Q9_CIOSA	ENSCSAVP00000006338	ENSCSAVP00000002057	Uncharacterized protein.	Uncharacterized protein.	0.814
H2YLY6_CIOSA	H2YA63_CIOSA	ENSCSAVP00000006338	ENSCSAVP00000002211	Uncharacterized protein.	Uncharacterized protein.	0.741
H2YLY6_CIOSA	H2YVJ7_CIOSA	ENSCSAVP00000006338	ENSCSAVP00000009358	Uncharacterized protein.	PDZ domain-containing protein.	0.447
H2YLY6_CIOSA	H2YXK2_CIOSA	ENSCSAVP00000006338	ENSCSAVP00000010063	Uncharacterized protein.	Uncharacterized protein.	0.817
H2YLY6_CIOSA	H2ZEM0_CIOSA	ENSCSAVP00000006338	ENSCSAVP00000016036	Uncharacterized protein.	Uncharacterized protein.	0.530
H2YUL9_CIOSA	H2Y9Q9_CIOSA	ENSCSAVP00000009029	ENSCSAVP00000002057	Uncharacterized protein.	Uncharacterized protein.	0.852
H2YUL9_CIOSA	H2YA63_CIOSA	ENSCSAVP00000009029	ENSCSAVP00000002211	Uncharacterized protein.	Uncharacterized protein.	0.842
H2YUL9_CIOSA	H2YVJ7_CIOSA	ENSCSAVP00000009029	ENSCSAVP00000009358	Uncharacterized protein.	PDZ domain-containing protein.	0.447
H2YUL9_CIOSA	H2YXK2_CIOSA	ENSCSAVP00000009029	ENSCSAVP00000010063	Uncharacterized protein.	Uncharacterized protein.	0.875
H2YUL9_CIOSA	H2ZEM0_CIOSA	ENSCSAVP00000009029	ENSCSAVP00000016036	Uncharacterized protein.	Uncharacterized protein.	0.555
H2YVJ7_CIOSA	H2YA63_CIOSA	ENSCSAVP00000009358	ENSCSAVP00000002211	PDZ domain-containing protein.	Uncharacterized protein.	0.443