STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2YXL5_CIOSAPalmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. (335 aa)    
Predicted Functional Partners:
H2Z6G0_CIOSA
Telo_bind domain-containing protein.
    
 0.729
H2ZHZ6_CIOSA
HRDC domain-containing protein.
    
 0.723
H2YYU1_CIOSA
Erf4 domain-containing protein.
    
 0.718
H2ZIL2_CIOSA
Zinc-hook domain-containing protein.
    
 0.637
H2ZHM3_CIOSA
PUA domain-containing protein.
    
 0.591
H2Y8J1_CIOSA
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
0.589
H2YQ16_CIOSA
Uncharacterized protein.
    
  0.550
H2YQ23_CIOSA
Metallophos domain-containing protein.
    
  0.550
H2ZHQ5_CIOSA
Uncharacterized protein.
    
  0.542
H2YAV6_CIOSA
AAA domain-containing protein.
     
 0.539
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.