Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
H2YXM2_CIOSAPeptidase_M14 domain-containing protein. (125 aa)    
Predicted Functional Partners:
H2YJQ3_CIOSA
P/Homo B domain-containing protein; Belongs to the peptidase S8 family.
   
  
 0.771
H2Z180_CIOSA
Uncharacterized protein.
     
 0.741
H2ZHW5_CIOSA
Peptidase_M14 domain-containing protein.
     
 0.741
H2Y7S9_CIOSA
Uncharacterized protein.
      
 0.704
H2YA50_CIOSA
Uncharacterized protein.
      
 0.700
H2ZA86_CIOSA
Uncharacterized protein.
     
  0.581
H2YK49_CIOSA
Uncharacterized protein.
      
 0.530
H2ZAK4_CIOSA
Arrestin_C domain-containing protein.
     
 0.513
H2YNS2_CIOSA
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.492
H2Y6B5_CIOSA
ENTH domain-containing protein.
   
 
 0.489
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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