Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2YYF5_CIOSAC2 domain-containing protein. (170 aa)    
Predicted Functional Partners:
H2YS59_CIOSA
Protein kinase domain-containing protein.
    
   0.953
H2YDV3_CIOSA
VIR_N domain-containing protein.
   
  
 0.706
H2Z3U1_CIOSA
HIT-type domain-containing protein.
      
 0.567
H2Z687_CIOSA
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.565
H2YYZ7_CIOSA
Protein kinase domain-containing protein.
    
   0.538
H2YCL3_CIOSA
Rab-GAP TBC domain-containing protein.
      
 0.529
H2YXS4_CIOSA
Uncharacterized protein.
    
 
 0.481
H2Z3H9_CIOSA
WD_REPEATS_REGION domain-containing protein.
    
 
 0.462
H2YDM8_CIOSA
Nfu_N domain-containing protein.
      
 0.460
H2YY02_CIOSA
DJ-1_PfpI domain-containing protein.
      
 0.458
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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