STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2YYS7_CIOSAUncharacterized protein; Belongs to the arylamine N-acetyltransferase family. (142 aa)    
Predicted Functional Partners:
H2Y6N5_CIOSA
Uncharacterized protein.
    
 0.868
H2ZBH2_CIOSA
WD_REPEATS_REGION domain-containing protein.
   
 0.720
H2ZP16_CIOSA
Ipi1_N domain-containing protein.
    
 0.698
H2Z1B4_CIOSA
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
  0.622
H2ZCD1_CIOSA
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
  0.612
H2YMR4_CIOSA
Uncharacterized protein.
    
  0.610
H2YPZ6_CIOSA
Uncharacterized protein.
    
  0.610
H2ZF86_CIOSA
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.598
H2Z4T3_CIOSA
CP-type G domain-containing protein.
   
  0.581
H2Y8A6_CIOSA
Calreticulin.
    
 0.580
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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