STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2YZ94_CIOSAUncharacterized protein. (258 aa)    
Predicted Functional Partners:
H2YIR6_CIOSA
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily.
 
  
 0.957
H2Z978_CIOSA
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
 
  
 0.957
H2ZAQ4_CIOSA
Aldolase_II domain-containing protein.
  
 
 0.821
H2ZJG7_CIOSA
Uncharacterized protein.
  
 
 0.821
H2ZJH0_CIOSA
Uncharacterized protein.
  
 
 0.821
H2YS43_CIOSA
Suf domain-containing protein.
     
 0.790
H2YCR4_CIOSA
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
     
 0.740
H2YWV2_CIOSA
Uncharacterized protein.
     
 0.735
H2YWM9_CIOSA
6PF2K domain-containing protein.
     
 0.732
H2ZHL5_CIOSA
Uncharacterized protein.
     
 0.732
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.