Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
H2YZ94_CIOSAUncharacterized protein. (258 aa)    
Predicted Functional Partners:
H2Z978_CIOSA
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes the formation of formate and 2-keto-4- methylthiobutyrate (KMTB) from 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene).
 
  
 0.970
H2YIR6_CIOSA
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily.
 
  
 0.964
H2YYF2_CIOSA
Uncharacterized protein.
      
 0.841
H2ZN48_CIOSA
Uncharacterized protein.
     
  0.811
H2YEX5_CIOSA
EF-hand domain-containing protein.
     
 0.763
H2ZLQ3_CIOSA
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
  0.759
H2ZAQ4_CIOSA
Aldolase_II domain-containing protein.
  
 
 0.749
H2ZJG7_CIOSA
Uncharacterized protein.
  
 
 0.749
H2ZJH0_CIOSA
Uncharacterized protein.
  
 
 0.749
H2YCR4_CIOSA
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
     
 0.719
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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