STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Z1U8_CIOSASphingomyelinase phosphodiesterase. (452 aa)    
Predicted Functional Partners:
H2YXL6_CIOSA
DAGKc domain-containing protein.
    
 0.659
H2YPF2_CIOSA
Uncharacterized protein.
     
 0.591
H2ZM97_CIOSA
PAP2_C domain-containing protein.
     
 0.546
H2YNL2_CIOSA
Lipid_DES domain-containing protein; Belongs to the fatty acid desaturase type 1 family. DEGS subfamily.
     
 0.526
H2YRD6_CIOSA
Uncharacterized protein.
     
 0.518
H2Z8J1_CIOSA
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
     
 0.514
H2YEX4_CIOSA
Glyco_hydro_59M domain-containing protein.
     
 0.498
H2YDB4_CIOSA
DAGKc domain-containing protein.
    
 0.497
H2Y8G4_CIOSA
Uncharacterized protein.
     
 0.489
H2YFL0_CIOSA
Uncharacterized protein.
     
 0.477
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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