STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Z2A1_CIOSA4Fe-4S ferredoxin-type domain-containing protein. (283 aa)    
Predicted Functional Partners:
H2YQV3_CIOSA
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
   
 0.999
H2YIG6_CIOSA
Succ_DH_flav_C domain-containing protein.
 
 0.998
H2ZJ42_CIOSA
FAD_binding_2 domain-containing protein.
 
 0.998
H2YXU2_CIOSA
Uncharacterized protein.
   
 0.997
H2ZA62_CIOSA
Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.
  
 0.997
H2ZLE1_CIOSA
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.997
H2Y5U8_CIOSA
Citrate synthase; Belongs to the citrate synthase family.
  
 0.996
H2YQI6_CIOSA
Uncharacterized protein.
  
 0.996
H2YT74_CIOSA
Uncharacterized protein; Belongs to the complex I 75 kDa subunit family.
   
 0.996
H2YVL3_CIOSA
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
  
 0.995
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.