STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Z3U7_CIOSAUncharacterized protein. (227 aa)    
Predicted Functional Partners:
H2YWW3_CIOSA
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.969
H2ZHI5_CIOSA
Hedgehog protein; Intercellular signal essential for a variety of patterning events during development.
    
 0.969
H2Z0N5_CIOSA
SSD domain-containing protein.
    
 0.918
H2ZF86_CIOSA
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.792
H2ZE81_CIOSA
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
  
 
 0.758
H2YAQ8_CIOSA
Tyrosine-protein kinase.
    
  0.675
H2ZR19_CIOSA
Uncharacterized protein.
    
 0.674
H2YLQ4_CIOSA
Uncharacterized protein.
    
  0.665
H2YR36_CIOSA
Uncharacterized protein.
    
 0.663
H2YW59_CIOSA
Uncharacterized protein.
    
  0.659
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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