STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZC68_CIOSAMyotubularin phosphatase domain-containing protein. (351 aa)    
Predicted Functional Partners:
H2Z7Y9_CIOSA
Uncharacterized protein.
   
0.869
H2YC96_CIOSA
SAC domain-containing protein.
     
 0.740
H2YNJ2_CIOSA
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.738
H2YYI3_CIOSA
SAC domain-containing protein.
   
 
 0.722
H2ZJY3_CIOSA
Uncharacterized protein.
     
 0.706
H2Y8Q6_CIOSA
Uncharacterized protein.
     
 0.668
H2Z9W7_CIOSA
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
     
 0.659
H2ZBG7_CIOSA
Uncharacterized protein.
     
 0.658
H2YFI6_CIOSA
Phosphoinositide phospholipase C.
     
 0.657
H2Y9T8_CIOSA
Uncharacterized protein.
     
 0.503
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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