STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZE67_CIOSAWD_REPEATS_REGION domain-containing protein. (326 aa)    
Predicted Functional Partners:
H2ZCI5_CIOSA
Uncharacterized protein.
   
 0.994
H2ZKJ4_CIOSA
Death domain-containing protein.
    
 0.994
H2ZMH6_CIOSA
WD_REPEATS_REGION domain-containing protein.
   
 0.993
H2ZKM4_CIOSA
Uncharacterized protein.
    
 0.992
H2YEA3_CIOSA
Uncharacterized protein.
 
 
 0.949
H2Z7E9_CIOSA
Uncharacterized protein.
    
 0.946
H2Z7K0_CIOSA
THOC2_N domain-containing protein.
    
 0.946
H2YJR8_CIOSA
RRM domain-containing protein.
   
 0.890
H2YKA0_CIOSA
Uncharacterized protein.
    
 0.868
H2YAM5_CIOSA
RRM domain-containing protein.
   
 0.826
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.