STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZG04_CIOSAEGF-like domain-containing protein. (602 aa)    
Predicted Functional Partners:
H2Z901_CIOSA
Uncharacterized protein.
  
 
 0.863
H2Y9S3_CIOSA
PLA2c domain-containing protein.
  
 
 0.859
H2Z679_CIOSA
Phospholipase A2.
  
 
 0.854
H2YF34_CIOSA
Uncharacterized protein.
    
 0.780
H2Z084_CIOSA
Lipase_GDSL domain-containing protein.
   
 0.773
H2YX12_CIOSA
Glutaredoxin domain-containing protein.
     
 0.771
H2YA36_CIOSA
CS domain-containing protein.
     
 0.766
H2YFW4_CIOSA
PA2c domain-containing protein.
     
 0.765
H2Y5P7_CIOSA
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
 0.664
H2YXF2_CIOSA
Uncharacterized protein; Belongs to the cytochrome P450 family.
    
 0.664
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.