STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ZPM5_CIOSARING-type domain-containing protein. (216 aa)    
Predicted Functional Partners:
H2YV94_CIOSA
Uncharacterized protein.
      
 0.657
H2YX88_CIOSA
Uncharacterized protein.
      
 0.657
H2YHR1_CIOSA
E2_bind domain-containing protein.
     
 0.589
H2Y9I4_CIOSA
AN1-type domain-containing protein.
    
 0.573
H2YEI0_CIOSA
Ubiquitin-like domain-containing protein.
   
 
  0.557
H2Z480_CIOSA
Uncharacterized protein.
    
  0.554
H2ZFX3_CIOSA
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.545
H2YAZ2_CIOSA
Uncharacterized protein.
      
 0.457
H2YUC7_CIOSA
Uncharacterized protein.
      
 0.457
H2Z055_CIOSA
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
     
 0.443
Your Current Organism:
Ciona savignyi
NCBI taxonomy Id: 51511
Other names: C. savignyi, Pacific transparent sea squirt, transparent tunicate
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.