STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR74112.1NifU protein; Cytoplasmic, score:8.87; COG0822 NifU homolog involved in Fe-S cluster formation; KEGG:K04488 NifU protein; HMMPfam:IPR002871; HMMPanther:IPR002871. (148 aa)    
Predicted Functional Partners:
iscS
Cysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
 
 0.999
ACR75645.1
Unknown cell location; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; KEGG:K04487 cysteine sulfinate desulfinase/cysteine desulfurase and related enzyme HMMPfam:IPR000192; Gene3D:IPR015421; ScanRegExp:IPR000192; superfamily:IPR015424.
 
 0.996
ACR76887.1
Cysteine desulfurase family protein; Cytoplasmic, score:8.87; COG0520 Selenocysteine lyase; KEGG:K04487 cysteine desulfurase family protein HMMPfam:IPR000192; Gene3D:IPR015421; HMMTigr:IPR010969; ScanRegExp:IPR000192; superfamily:IPR015424.
  
 
 0.986
ACR76896.1
Biotin/lipoyl attachment; Cytoplasmic, score:8.87; COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family; KEGG:K07402 biotin/lipoyl attachment; superfamily:IPR002376.
  
 
 0.932
ACR76715.1
Hypothetical protein; Cytoplasmic, score:8.87; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component; KEGG:0hypothetical protein; HMMPfam:IPR000825.
  
  
 0.921
ACR76716.1
ABC transporter ATP-binding protein; CytoplasmicMembrane, score:9.49; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component; KEGG:K09013 ABC transporter ATP-binding protein; HMMPfam:IPR000432; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMPanther:IPR010230; HMMSmart:IPR003593; ScanRegExp:IPR003439.
  
  
 0.904
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
  
  
 0.876
dnaK-2
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.846
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 0.845
ACR74110.1
Hypothetical protein; Cytoplasmic, score:8.87; COG1959 Predicted transcriptional regulator; HMMPfam:IPR000944; BlastProDom:IPR000944; HMMTigr:IPR000944; ScanRegExp:IPR000944.
 
  
 0.842
Your Current Organism:
Eubacterium rectale
NCBI taxonomy Id: 515619
Other names: Agathobacter rectalis ATCC 33656, Eubacterium rectale ATCC 33656, [. rectale ATCC 33656, [Eubacterium] rectale ATCC 33656
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.