Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACR76932.1Hypothetical protein; Unknown cell location. (233 aa)    
Predicted Functional Partners:
ACR76931.1
Hypothetical protein; CytoplasmicMembrane, score:9.99.
       0.773
ACR76928.1
Hypothetical protein; Cytoplasmic, score:8.87.
       0.768
ACR76929.1
ABC transporter, ATP-binding protein; CytoplasmicMembrane, score:9.49; COG1131 ABC-type multidrug transport system, ATPase component; KEGG:K09687 ABC transporter, ATP-binding protein; HMMPfam:IPR003439; BlastProDom:IPR003439; HMMSmart:IPR003593; ScanRegExp:IPR003439.
       0.768
ACR76930.1
Hypothetical protein; CytoplasmicMembrane, score:9.99.
       0.768
ACR76933.1
Hypothetical protein; Unknown cell location.
       0.565
Your Current Organism:
Eubacterium rectale
NCBI taxonomy Id: 515619
Other names: Agathobacter rectalis ATCC 33656, Eubacterium rectale ATCC 33656, [. rectale ATCC 33656, [Eubacterium] rectale ATCC 33656
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