STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR71792.1Type IV pilus assembly protein PilB; Psort-B: Cytoplasmic, score:9.98; COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; HMMPfam:IPR001482; HMMPfam:IPR007831; BlastProDom:IPR001482; HMMSmart:IPR003593; ScanRegExp:IPR001482; K02652 type IV pilus assembly protein PilB. (615 aa)    
Predicted Functional Partners:
ACR71798.1
Type IV pilus assembly protein PilC; Psort-B: CytoplasmicMembrane, score:9.99; COG1459 Type II secretory pathway, component PulF; HMMPfam:IPR001992; K02653 type IV pilus assembly protein PilC.
 
 
 0.993
ACR71800.1
Leader peptidase (prepilin peptidase) / N-methyltransferase; Psort-B: CytoplasmicMembrane, score:10.00; COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases; HMMPfam:IPR000045; HMMPfam:IPR010627; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase.
 
 
 0.906
ACR71801.1
Psort-B: Unknown cell location; COG4972 Tfp pilus assembly protein, ATPase PilM; HMMPfam:IPR007813; HMMTigr:IPR005883; K02662 type IV pilus assembly protein PilM.
 
 
 
 0.878
ACR71799.1
Hypothetical protein; Psort-B: Unknown cell location; COG4969 Tfp pilus assembly protein, major pilin PilA; HMMPfam:IPR012902; HMMTigr:IPR012902; ScanRegExp:IPR001120.
 
 
 0.863
ACR71793.1
Twitching motility protein PilT; Psort-B: Cytoplasmic, score:9.98; COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT; HMMPfam:IPR001482; BlastProDom:IPR001482; HMMSmart:IPR003593; HMMTigr:IPR006321; ScanRegExp:IPR001482; K02669 twitching motility protein PilT.
 
  
0.826
ACR71803.1
Hypothetical protein; Psort-B: Unknown cell location; HMMPfam:IPR012902; HMMTigr:IPR012902.
  
 
 0.798
ACR72213.1
Competence protein ComEA; Psort-B: CytoplasmicMembrane, score:9.82; COG1555 DNA uptake protein and related DNA-binding proteins; HMMPfam:IPR000445; HMMTigr:IPR004509; superfamily:IPR010994; K02237 competence protein ComEA.
  
  
 0.795
ACR71802.1
Hypothetical protein; Psort-B: Unknown cell location.
  
 
 0.729
ACR72853.1
Two-component system, PleD related family, response regulator; Psort-B: Cytoplasmic, score:8.87; COG2199 FOG: GGDEF domain; HMMPfam:IPR000160; HMMSmart:IPR000160; HMMTigr:IPR000160; K02488 two-component system, PleD related family, response regulator.
   
 
 0.666
ACR71790.1
X-Pro aminopeptidase; Psort-B: Cytoplasmic, score:8.87; COG0006 Xaa-Pro aminopeptidase; HMMPfam:IPR000587; HMMPfam:IPR000994; Gene3D:IPR000994; HMMPanther:IPR000994; K01262 X-Pro aminopeptidase.
       0.605
Your Current Organism:
Eubacterium eligens
NCBI taxonomy Id: 515620
Other names: Eubacterium eligens ATCC 27750, [. eligens ATCC 27750, [Eubacterium] eligens ATCC 27750
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