node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplA | rplD | EUBELI_00280 | EUBELI_00300 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.998 |
rplA | rplK | EUBELI_00280 | EUBELI_00279 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplA | rplM | EUBELI_00280 | EUBELI_00332 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.996 |
rplA | rplN | EUBELI_00280 | EUBELI_00309 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.995 |
rplA | rplS | EUBELI_00280 | EUBELI_01049 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.995 |
rplA | rpmA | EUBELI_00280 | EUBELI_01015 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Psort-B: Unknown cell location; COG0211 Ribosomal protein L27; HMMPfam:IPR001684; BlastProDom:IPR001684; FPrintScan:IPR001684; HMMPanther:IPR001684; HMMTigr:IPR001684; ScanRegExp:IPR001684; K02899 large subunit ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.992 |
rplA | rpsB | EUBELI_00280 | EUBELI_00845 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Psort-B: Cytoplasmic, score:8.87; COG0052 Ribosomal protein S2; HMMPfam:IPR001865; FPrintScan:IPR001865; HMMPanther:IPR005706; HMMTigr:IPR005706; ScanRegExp:IPR001865; superfamily:IPR001865; K02967 small subunit ribosomal protein S2. | 0.994 |
rplA | rpsI | EUBELI_00280 | EUBELI_00333 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Psort-B: Cytoplasmic, score:8.87; COG0103 Ribosomal protein S9; HMMPfam:IPR000754; BlastProDom:IPR000754; Gene3D:IPR014721; HMMPanther:IPR000754; ScanRegExp:IPR000754; K02996 small subunit ribosomal protein S9. | 0.992 |
rplA | rpsJ | EUBELI_00280 | EUBELI_00298 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Small subunit ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.994 |
rplA | rpsP | EUBELI_00280 | EUBELI_01052 | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | Psort-B: Cytoplasmic, score:8.87; COG0228 Ribosomal protein S16; HMMPfam:IPR000307; BlastProDom:IPR000307; Gene3D:IPR000307; HMMPanther:IPR000307; HMMTigr:IPR000307; superfamily:IPR000307; K02959 small subunit ribosomal protein S16. | 0.989 |
rplD | rplA | EUBELI_00300 | EUBELI_00280 | Large subunit ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. | 0.998 |
rplD | rplK | EUBELI_00300 | EUBELI_00279 | Large subunit ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Large subunit ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.992 |
rplD | rplM | EUBELI_00300 | EUBELI_00332 | Large subunit ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Large subunit ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.997 |
rplD | rplN | EUBELI_00300 | EUBELI_00309 | Large subunit ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Large subunit ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.997 |
rplD | rplS | EUBELI_00300 | EUBELI_01049 | Large subunit ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.993 |
rplD | rpmA | EUBELI_00300 | EUBELI_01015 | Large subunit ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Psort-B: Unknown cell location; COG0211 Ribosomal protein L27; HMMPfam:IPR001684; BlastProDom:IPR001684; FPrintScan:IPR001684; HMMPanther:IPR001684; HMMTigr:IPR001684; ScanRegExp:IPR001684; K02899 large subunit ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.991 |
rplD | rpsB | EUBELI_00300 | EUBELI_00845 | Large subunit ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Psort-B: Cytoplasmic, score:8.87; COG0052 Ribosomal protein S2; HMMPfam:IPR001865; FPrintScan:IPR001865; HMMPanther:IPR005706; HMMTigr:IPR005706; ScanRegExp:IPR001865; superfamily:IPR001865; K02967 small subunit ribosomal protein S2. | 0.998 |
rplD | rpsI | EUBELI_00300 | EUBELI_00333 | Large subunit ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Psort-B: Cytoplasmic, score:8.87; COG0103 Ribosomal protein S9; HMMPfam:IPR000754; BlastProDom:IPR000754; Gene3D:IPR014721; HMMPanther:IPR000754; ScanRegExp:IPR000754; K02996 small subunit ribosomal protein S9. | 0.994 |
rplD | rpsJ | EUBELI_00300 | EUBELI_00298 | Large subunit ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Small subunit ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.998 |
rplD | rpsP | EUBELI_00300 | EUBELI_01052 | Large subunit ribosomal protein L4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | Psort-B: Cytoplasmic, score:8.87; COG0228 Ribosomal protein S16; HMMPfam:IPR000307; BlastProDom:IPR000307; Gene3D:IPR000307; HMMPanther:IPR000307; HMMTigr:IPR000307; superfamily:IPR000307; K02959 small subunit ribosomal protein S16. | 0.988 |