STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACR72228.1Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein; Psort-B: Cytoplasmic, score:8.87; COG1522 Transcriptional regulators; HMMPfam:IPR000485; FPrintScan:IPR000485; Gene3D:IPR011991; HMMSmart:IPR000485; superfamily:IPR011008; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein. (151 aa)    
Predicted Functional Partners:
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
  
 0.575
ACR72227.1
MoxR-like ATPase; Psort-B: Cytoplasmic, score:9.98; COG0714 MoxR-like ATPases; HMMPfam:IPR011703; K03924 MoxR-like ATPase.
  
    0.520
ACR72226.1
Hypothetical protein; Psort-B: Cytoplasmic, score:8.87; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain); HMMPfam:IPR002881; ScanRegExp:IPR001209.
       0.510
ACR72225.1
Hypothetical protein; Psort-B: CytoplasmicMembrane, score:9.99.
       0.503
Your Current Organism:
Eubacterium eligens
NCBI taxonomy Id: 515620
Other names: Eubacterium eligens ATCC 27750, [. eligens ATCC 27750, [Eubacterium] eligens ATCC 27750
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