Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
bpr_I0739 | bpr_I0740 | Peptidyl-prolyl cis-trans isomerase cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | NADH:flavin oxidoreductase/NADH oxidase family protein. | 0.545 |
bpr_I0739 | bpr_I0741 | Peptidyl-prolyl cis-trans isomerase cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Hypothetical protein. | 0.485 |
bpr_I0739 | bpr_I0742 | Peptidyl-prolyl cis-trans isomerase cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | Acylphosphatase. | 0.508 |
bpr_I0740 | bpr_I0739 | NADH:flavin oxidoreductase/NADH oxidase family protein. | Peptidyl-prolyl cis-trans isomerase cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.545 |
bpr_I0740 | bpr_I0741 | NADH:flavin oxidoreductase/NADH oxidase family protein. | Hypothetical protein. | 0.762 |
bpr_I0740 | bpr_I0742 | NADH:flavin oxidoreductase/NADH oxidase family protein. | Acylphosphatase. | 0.772 |
bpr_I0741 | bpr_I0739 | Hypothetical protein. | Peptidyl-prolyl cis-trans isomerase cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.485 |
bpr_I0741 | bpr_I0740 | Hypothetical protein. | NADH:flavin oxidoreductase/NADH oxidase family protein. | 0.762 |
bpr_I0741 | bpr_I0742 | Hypothetical protein. | Acylphosphatase. | 0.773 |
bpr_I0742 | bpr_I0739 | Acylphosphatase. | Peptidyl-prolyl cis-trans isomerase cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.508 |
bpr_I0742 | bpr_I0740 | Acylphosphatase. | NADH:flavin oxidoreductase/NADH oxidase family protein. | 0.772 |
bpr_I0742 | bpr_I0741 | Acylphosphatase. | Hypothetical protein. | 0.773 |