STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
est12ACarbohydrate esterase family 12 Est12A. (576 aa)    
Predicted Functional Partners:
pgl28A
Polygalacturonase Pgl28A; Belongs to the glycosyl hydrolase 28 family.
 
 
 0.808
pgl28B
Polygalacturonase Pgl28B; Belongs to the glycosyl hydrolase 28 family.
 
 
 0.793
gh115B
Alpha-glucuronidase Gh115B.
 
   0.783
pme8A
Pectin methylesterase Pme8A.
 
   
 0.782
gh115A
Alpha-glucuronidase Gh115A.
 
   0.777
xsa43C
Xylosidase/arabinofuranosidase Xsa43C; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.765
gh105B
Unsaturated rhamnogalacturonyl hydrolase Gh105B.
 
    0.764
gh105A
Unsaturated rhamnogalacturonyl hydrolase Gh105A.
 
    0.763
gh105C
Unsaturated rhamnogalacturonyl hydrolase Gh105C.
 
    0.751
bpr_I1151
Hypothetical protein.
 
   0.742
Your Current Organism:
Butyrivibrio proteoclasticus
NCBI taxonomy Id: 515622
Other names: B. proteoclasticus B316, Butyrivibrio proteoclasticus B316, Butyrivibrio proteoclasticus str. B316, Butyrivibrio proteoclasticus strain B316
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.