Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
man38AAlpha-mannosidase Man38A. (1067 aa)    
Predicted Functional Partners:
fuc29A
alpha-L-fucosidase Fuc29A.
 
   
 0.809
ADL35706.1
Hypothetical protein.
  
    0.777
ADL35708.1
PHP domain-containing protein.
 
     0.651
man2A
Beta-mannosidase Man2A.
 
   
 0.628
bpr_I2104
PTS system IIABC fructose-specific family.
  
  
 0.570
clpC
ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family.
   
  
 0.566
cmk
Cytidylate kinase Cmk.
  
    0.566
clpA
ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family.
   
  
 0.566
clpB
ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.
   
  
 0.566
bpr_I1171
Two component system response regulator.
  
    0.515
Your Current Organism:
Butyrivibrio proteoclasticus
NCBI taxonomy Id: 515622
Other names: B. proteoclasticus B316, Butyrivibrio proteoclasticus B316, Butyrivibrio proteoclasticus str. B316, Butyrivibrio proteoclasticus strain B316
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