Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADL35733.1Hypothetical protein; Belongs to the BI1 family. (234 aa)    
Predicted Functional Partners:
ADL35734.1
ABC transporter ATP-binding protein.
  
   0.638
ADL35735.1
Hypothetical protein.
       0.596
ADL35732.1
Transglutaminase domain-containing protein.
       0.573
ADL35730.1
ATPase AAA family.
  
    0.548
ADL35731.1
Hypothetical protein.
       0.540
bpr_I0218
Sugar ABC transporter substrate-binding protein.
  
     0.439
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
   0.424
bpr_I0356
Hypothetical protein.
  
     0.406
Your Current Organism:
Butyrivibrio proteoclasticus
NCBI taxonomy Id: 515622
Other names: B. proteoclasticus B316, Butyrivibrio proteoclasticus B316, Butyrivibrio proteoclasticus str. B316, Butyrivibrio proteoclasticus strain B316
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