Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADL35822.1 | ADL35824.1 | bpr_III136 | bpr_III138 | Acetyltransferase GNAT family/NUDIX domain-containing protein. | MFS transporter. | 0.598 |
ADL35822.1 | bpr_I0269 | bpr_III136 | bpr_I0269 | Acetyltransferase GNAT family/NUDIX domain-containing protein. | Pyruvate:ferredoxin oxidoreductase. | 0.412 |
ADL35822.1 | crcB | bpr_III136 | bpr_III137 | Acetyltransferase GNAT family/NUDIX domain-containing protein. | CrcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.701 |
ADL35824.1 | ADL35822.1 | bpr_III138 | bpr_III136 | MFS transporter. | Acetyltransferase GNAT family/NUDIX domain-containing protein. | 0.598 |
ADL35824.1 | bpr_I0133 | bpr_III138 | bpr_I0133 | MFS transporter. | Hypothetical protein. | 0.490 |
ADL35824.1 | bpr_I0269 | bpr_III138 | bpr_I0269 | MFS transporter. | Pyruvate:ferredoxin oxidoreductase. | 0.452 |
ADL35824.1 | bpr_I0776 | bpr_III138 | bpr_I0776 | MFS transporter. | ABC transporter permease protein. | 0.453 |
ADL35824.1 | bpr_I0906 | bpr_III138 | bpr_I0906 | MFS transporter. | Transcriptional regulator AraC family. | 0.466 |
ADL35824.1 | bpr_I2104 | bpr_III138 | bpr_I2104 | MFS transporter. | PTS system IIABC fructose-specific family. | 0.474 |
ADL35824.1 | bpr_I2779 | bpr_III138 | bpr_I2779 | MFS transporter. | Hypothetical protein. | 0.498 |
ADL35824.1 | crcB | bpr_III138 | bpr_III137 | MFS transporter. | CrcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. | 0.687 |
ADL35824.1 | gltB | bpr_III138 | bpr_I0123 | MFS transporter. | Glutamate synthase large subunit GltB. | 0.579 |
ADL35824.1 | guaA | bpr_III138 | bpr_I2780 | MFS transporter. | GMP synthase GuaA; Catalyzes the synthesis of GMP from XMP. | 0.455 |
bpr_I0133 | ADL35824.1 | bpr_I0133 | bpr_III138 | Hypothetical protein. | MFS transporter. | 0.490 |
bpr_I0269 | ADL35822.1 | bpr_I0269 | bpr_III136 | Pyruvate:ferredoxin oxidoreductase. | Acetyltransferase GNAT family/NUDIX domain-containing protein. | 0.412 |
bpr_I0269 | ADL35824.1 | bpr_I0269 | bpr_III138 | Pyruvate:ferredoxin oxidoreductase. | MFS transporter. | 0.452 |
bpr_I0269 | bpr_I0906 | bpr_I0269 | bpr_I0906 | Pyruvate:ferredoxin oxidoreductase. | Transcriptional regulator AraC family. | 0.401 |
bpr_I0269 | bpr_I2104 | bpr_I0269 | bpr_I2104 | Pyruvate:ferredoxin oxidoreductase. | PTS system IIABC fructose-specific family. | 0.448 |
bpr_I0269 | gltB | bpr_I0269 | bpr_I0123 | Pyruvate:ferredoxin oxidoreductase. | Glutamate synthase large subunit GltB. | 0.842 |
bpr_I0269 | guaA | bpr_I0269 | bpr_I2780 | Pyruvate:ferredoxin oxidoreductase. | GMP synthase GuaA; Catalyzes the synthesis of GMP from XMP. | 0.463 |
page 1 of 3