STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_0042PFAM: protein of unknown function DUF583; KEGG: dth:DICTH_1744 hypothetical protein. (128 aa)    
Predicted Functional Partners:
Dtur_0043
PFAM: Peptidase M23; KEGG: dth:DICTH_1745 peptidase, M23/M37 family.
 
   
 0.889
Dtur_0041
KEGG: dth:DICTH_1743 carbonic anhydrases/acetyltransferase, isoleucine patch superfamily.
  
    0.549
Dtur_0040
PFAM: aminotransferase class V; KEGG: dth:DICTH_1742 soluble hydrogenase, small subunit.
       0.484
Dtur_0044
KEGG: dth:DICTH_1746 hypothetical protein.
       0.472
Dtur_0045
KEGG: dth:DICTH_1747 hypothetical protein.
       0.472
Dtur_0046
KEGG: dth:DICTH_1749 hypothetical protein.
       0.472
Dtur_0038
PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: dth:DICTH_1739 cob(I)alamin adenosyltransferase.
       0.447
Dtur_0039
KEGG: dth:DICTH_1741 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: amino acid-binding ACT domain protein; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding.
       0.447
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.