STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_0093PFAM: ABC-2 type transporter; KEGG: dth:DICTH_1796 ABC-2 type transporter family. (356 aa)    
Predicted Functional Partners:
Dtur_0095
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dth:DICTH_1798 ABC transporter, ATP-binding protein.
 
  
 0.956
Dtur_0094
PFAM: ABC-2 type transporter; KEGG: dth:DICTH_1797 ABC-2 type transporter family.
 
  
 
0.893
Dtur_0062
PFAM: ABC-2 type transporter; KEGG: dth:DICTH_1764 ABC-2 type transporter.
  
  
  0.781
Dtur_0061
KEGG: dth:DICTH_1763 ABC transporter, ATP binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
 
  
 0.684
Dtur_0096
PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: dth:DICTH_1801 ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family.
       0.615
Dtur_0097
KEGG: dth:DICTH_1802 beta-mannanase/endoglucanase A.
 
     0.570
Dtur_0010
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hau:Haur_2877 ABC transporter related.
 
  
 0.569
Dtur_0009
KEGG: hau:Haur_2878 ABC-2 type transporter.
  
  
  0.535
Dtur_0214
PFAM: extracellular solute-binding protein family 5; KEGG: dth:DICTH_1944 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein.
  
  
  0.486
Dtur_0275
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: dth:DICTH_0007 tetratricopeptide repeat domain protein.
 
    0.418
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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