STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_0206PFAM: major facilitator superfamily MFS_1; KEGG: dth:DICTH_1935 major facilitator family protein. (446 aa)    
Predicted Functional Partners:
Dtur_0207
Methyltransferase; KEGG: dth:DICTH_1937 methyltransferase.
 
     0.635
Dtur_0284
KEGG: npu:Npun_R2901 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
     
 0.618
Dtur_0838
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dth:DICTH_0681 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.600
Dtur_0209
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: dth:DICTH_1939 stage 0 sporulation protein J; Belongs to the ParB family.
     
 0.520
Dtur_0208
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: dth:DICTH_1938 ATPases involved in chromosome partitioning.
     
 0.516
Dtur_0210
Diguanylate cyclase and metal dependent phosphohydrolase; KEGG: dth:DICTH_1940 sensory box protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; SMART: PAS domain containing protein.
     
 0.516
Dtur_0211
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dth:DICTH_1942 phosphatase.
  
    0.508
Dtur_0205
KEGG: dth:DICTH_1934 hypothetical protein.
  
    0.498
Dtur_0484
PFAM: acyl-CoA reductase; Aldehyde Dehydrogenase; KEGG: aae:aq_186 aldehyde dehydrogenase.
  
 0.470
Dtur_1680
PFAM: ROK family protein; KEGG: dth:DICTH_1572 xylose repressor.
  
  
 0.456
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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