STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_0299KEGG: dth:DICTH_0028 hypothetical protein. (150 aa)    
Predicted Functional Partners:
Dtur_0300
PFAM: protein of unknown function DUF112 transmembrane; KEGG: dth:DICTH_0029 tricarboxylate transport membrane protein RctA.
 
     0.907
Dtur_0298
PFAM: conserved hypothetical protein; KEGG: dth:DICTH_0027 tricarboxylate-binding protein.
 
     0.885
Dtur_0301
KEGG: dth:DICTH_0030 hypothetical protein.
 
     0.776
Dtur_0302
PFAM: oxidoreductase domain protein; KEGG: dth:DICTH_0031 oxidoreductase family, NAD-binding Rossmann fold protein.
 
     0.744
Dtur_0303
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dth:DICTH_0032 trap dicarboxylate transporter, dCTP subunit, putative.
 
     0.634
Dtur_1773
PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: dth:DICTH_1663 putative C4-dicarboxylate transporter, small permease protein.
  
     0.463
Dtur_1793
PFAM: Citrate transporter; protein of unknown function DUF401; KEGG: dth:DICTH_1683 hypothetical protein.
  
     0.405
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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