STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_0390PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dth:DICTH_0121 ABC transporter, ATP-binding protein. (232 aa)    
Predicted Functional Partners:
Dtur_0391
PFAM: protein of unknown function DUF214; KEGG: dth:DICTH_0122 ABC transporter, permease protein.
 
 
 0.998
Dtur_0738
PFAM: protein of unknown function DUF214; KEGG: dth:DICTH_0574 ABC-type transport system, involved in lipoprotein release, permease component.
 
 0.979
Dtur_0839
PFAM: protein of unknown function DUF214; KEGG: dth:DICTH_0682 ABC transporter, permease protein.
 
 0.979
Dtur_1052
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0910 glutamine ABC transporter, permease protein.
 
 
  
 0.905
Dtur_0159
KEGG: dth:DICTH_1887 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
    
0.904
Dtur_0742
KEGG: dth:DICTH_0578 hypothetical protein.
   
 
 0.739
Dtur_0739
TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: dth:DICTH_0575 efflux transporter, RND family, MFP subunit.
  
 
 0.712
Dtur_0673
PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: dth:DICTH_0509 ABC-type multidrug/protein/lipid transport system, ATPase component.
     
0.706
Dtur_0860
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0707 oligopeptide ABC transporter permease protein.
 
 
    0.689
Dtur_0389
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: dth:DICTH_0120 dehydrogenase.
       0.548
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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