STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_0470PFAM: protein of unknown function DUF1659; KEGG: dth:DICTH_0366 hypothetical protein. (73 aa)    
Predicted Functional Partners:
Dtur_0469
KEGG: dth:DICTH_0365 hypothetical protein.
 
     0.895
Dtur_0467
PFAM: Peptidase M15A; KEGG: dth:DICTH_0363 GP46.
       0.539
Dtur_0471
KEGG: dth:DICTH_0367 hypothetical protein.
       0.539
Dtur_0466
KEGG: dth:DICTH_0362 hypothetical protein.
       0.521
Dtur_0468
KEGG: dth:DICTH_0364 hypothetical protein.
       0.521
Dtur_0473
PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: dth:DICTH_0369 cleavage and polyadenylation specificity factor.
 
     0.494
Dtur_0472
KEGG: dth:DICTH_0368 iron-sulfur cluster-binding protein.
       0.449
Dtur_0474
PFAM: peptidase M28; KEGG: dth:DICTH_0370 protein containing aminopeptidase domain, putative.
       0.426
Dtur_0210
Diguanylate cyclase and metal dependent phosphohydrolase; KEGG: dth:DICTH_1940 sensory box protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; SMART: PAS domain containing protein.
  
     0.412
Dtur_0529
PFAM: transcriptional regulator PadR family protein; KEGG: dth:DICTH_0142 transcriptional regulator, PadR family, putative.
  
     0.402
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.