STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_0537Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: pca:Pcar_3081 two component signal transduction response regulator. (224 aa)    
Predicted Functional Partners:
Dtur_0538
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: cyt:cce_3379 two-component sensor histidine kinase.
 
 0.981
Dtur_0748
PFAM: GAF domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: dth:DICTH_0585 alkaline phosphatase synthesis sensor protein PhoR.
 
 0.911
Dtur_1236
KEGG: dth:DICTH_1121 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
 
 0.908
Dtur_0153
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: dth:DICTH_1881 sensory transduction histidine kinase.
 
 0.891
Dtur_0284
KEGG: npu:Npun_R2901 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
 0.838
Dtur_0314
Two component transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: dth:DICTH_0042 two-component response regulator.
  
   
 0.671
Dtur_0239
PFAM: response regulator receiver; KEGG: tye:THEYE_A1490 response regulator.
  
 
 0.616
Dtur_1753
KEGG: dth:DICTH_1642 GGDEF domain; TIGRFAM: diguanylate cyclase; metal dependent phophohydrolase; PFAM: GGDEF domain containing protein; periplasmic binding protein/LacI transcriptional regulator; GAF domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region.
  
 
 0.584
Dtur_0286
PFAM: histidine kinase A domain protein; KEGG: cth:Cthe_0083 serine phosphatase.
  
 
 0.545
Dtur_0917
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; KEGG: dth:DICTH_0767 sensory transduction histidine kinase.
  
 
 0.545
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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