STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rexCoA-binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. (208 aa)    
Predicted Functional Partners:
Dtur_0560
TIGRFAM: hydrogenase, Fe-only; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; iron hydrogenase small subunit; hydrogenase large subunit domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dth:DICTH_0412 periplasmic [Fe] hydrogenase 1.
 
  
 0.916
Dtur_0556
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: dth:DICTH_0408 ferredoxin 2.
  
  
 0.856
Dtur_0558
PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: dth:DICTH_0410 NADH-ubiquinone oxidoreductase 24 kda subunit.
 
  
 0.834
Dtur_0559
NADH dehydrogenase (quinone); PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dth:DICTH_0411 Fe-hydrogenase beta subunit.
  
  
 0.807
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
   
    0.739
Dtur_0557
Protein serine/threonine phosphatase; PFAM: Stage II sporulation E family protein; KEGG: dth:DICTH_0409 serine phosphatase.
     
 0.732
Dtur_0484
PFAM: acyl-CoA reductase; Aldehyde Dehydrogenase; KEGG: aae:aq_186 aldehyde dehydrogenase.
  
  
 0.506
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate.
      
 0.494
rpsP
PFAM: ribosomal protein S16; KEGG: dth:DICTH_1427 ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
   
    0.491
Dtur_1632
PFAM: iron-containing alcohol dehydrogenase; KEGG: dth:DICTH_1523 iron containing alcohol dehydrogenase.
  
  
 0.479
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.