STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_0651PFAM: protein of unknown function DUF894 DitE; major facilitator superfamily MFS_1; KEGG: dth:DICTH_0487 permeases of the major facilitator superfamily. (413 aa)    
Predicted Functional Partners:
Dtur_0652
N-acylglucosamine 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man). Catalyzes epimerization but also isomerization for beta-1,4- and alpha-1,4-gluco-oligosaccharides. Can use cellobiose, lactose, cellotriose, maltose and maltotriose.
  
    0.777
Dtur_0655
PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: dth:DICTH_0491 translocator protein, LysE family.
     
 0.556
Dtur_0653
KEGG: dth:DICTH_0489 permease, putative.
       0.539
Dtur_0654
PFAM: protein of unknown function DUF123; SMART: Excinuclease ABC C subunit domain protein; KEGG: dth:DICTH_0490 hypothetical protein.
       0.539
Dtur_0838
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: dth:DICTH_0681 secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.470
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.412
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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