STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_0768PFAM: ABC transporter related; ABC transporter, conserved site; SMART: AAA ATPase; KEGG: dth:DICTH_0605 ABC transporter ATP-binding protein. (432 aa)    
Predicted Functional Partners:
Dtur_0769
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0606 ABC transporter permease protein.
 
   
 0.962
Dtur_0839
PFAM: protein of unknown function DUF214; KEGG: dth:DICTH_0682 ABC transporter, permease protein.
 
      0.899
Dtur_0563
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0415 AbcB protein, putative.
  
 0.851
Dtur_0738
PFAM: protein of unknown function DUF214; KEGG: dth:DICTH_0574 ABC-type transport system, involved in lipoprotein release, permease component.
 
      0.816
Dtur_1705
KEGG: dth:DICTH_1597 oligopeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.674
Dtur_0764
KEGG: hypothetical protein.
       0.658
Dtur_0765
KEGG: dth:DICTH_0602 hypothetical protein.
       0.658
Dtur_0766
PFAM: protein of unknown function DUF107; KEGG: dth:DICTH_0603 YqeZ.
       0.658
Dtur_0767
KEGG: dth:DICTH_0604 hypothetical protein.
       0.658
Dtur_0564
KEGG: dth:DICTH_0416 hypothetical protein.
  
  
 0.648
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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