STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_0844Putative transmembrane anti-sigma factor; KEGG: dth:DICTH_0687 hypothetical protein. (146 aa)    
Predicted Functional Partners:
Dtur_0843
RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: dth:DICTH_0686 RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
   0.845
Dtur_0845
KEGG: dth:DICTH_0689 hypothetical protein.
       0.794
Dtur_0842
MlpD; KEGG: dth:DICTH_0685 MlpD.
       0.697
Dtur_0303
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dth:DICTH_0032 trap dicarboxylate transporter, dCTP subunit, putative.
   
 
 0.683
Dtur_1774
PFAM: TRAP dicarboxylate transporter- DctP subunit; KEGG: dth:DICTH_1664 putative C4-dicarboxylate transporter, periplasmic C4-dicarboxylate-binding protein.
   
 
 0.683
Dtur_1728
KEGG: dth:DICTH_1619 hypothetical protein.
  
     0.541
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
       0.516
Dtur_0840
KEGG: dth:DICTH_0683 hypothetical protein.
       0.431
rny
RNA binding metal dependent phosphohydrolase; Endoribonuclease that initiates mRNA decay.
   
   0.422
Dtur_0839
PFAM: protein of unknown function DUF214; KEGG: dth:DICTH_0682 ABC transporter, permease protein.
       0.419
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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