STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_08584-phytase; PFAM: extracellular solute-binding protein family 5; KEGG: dth:DICTH_0704 bacterial extracellular solute-binding protein, family 5. (524 aa)    
Predicted Functional Partners:
Dtur_0859
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0706 oligopeptide/dipeptide ABC transporter, permease protein.
   0.978
Dtur_0860
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0707 oligopeptide ABC transporter permease protein.
   0.963
Dtur_1136
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1008 dipeptide transport system permease protein DppB.
   0.959
Dtur_0665
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0501 oligopeptide ABC transporter, permease protein.
   0.795
Dtur_1137
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1009 dipeptide ABC transporter.
   0.715
Dtur_0855
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_0701 maltose ABC transporter, permease protein.
  
 
  0.678
Dtur_1707
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dth:DICTH_1599 oligopeptide ABC transporter, permease protein.
   0.673
Dtur_0854
PFAM: extracellular solute-binding protein family 1; KEGG: dth:DICTH_0700 maltose ABC transporter, periplasmic maltose-binding protein.
    
 0.618
Dtur_0857
Arabinogalactan endo-1,4-beta-galactosidase; PFAM: Ig domain protein; glycosyl hydrolase 53 domain protein; KEGG: dth:DICTH_0703 arabinogalactan endo-1,4-beta-galactosidase, putative.
       0.598
mgsA
Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate.
       0.591
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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