STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dtur_0888KEGG: dth:DICTH_0735 hypothetical protein. (239 aa)    
Predicted Functional Partners:
Dtur_0889
KEGG: dth:DICTH_0736 hypothetical protein.
       0.746
Dtur_0890
KEGG: dth:DICTH_0737 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.
       0.537
Dtur_0891
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: dth:DICTH_0738 HNH endonuclease domain protein.
       0.487
Dtur_0892
TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; calcium-translocating P-type ATPase, PMCA-type; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: dth:DICTH_0739 cation transport ATPase.
       0.447
Dtur_0893
PFAM: Peptidoglycan-binding LysM; KEGG: dth:DICTH_0740 LysM domain protein.
       0.447
Your Current Organism:
Dictyoglomus turgidum
NCBI taxonomy Id: 515635
Other names: D. turgidum DSM 6724, Dictyoglomus turgidum DSM 6724, Dictyoglomus turgidum str. DSM 6724, Dictyoglomus turgidum strain DSM 6724
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